論文紹介2014

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 No.36 2015.3.16
担当者:伊藤優志
論文Microsecond Folding and Domain Motions of a Spider Silk Protein Structural Switch
Julia Ries et al.
J. Am. Chem. Soc. 2014, 136, 17136-17144

 No.35 2015.3.9
担当者:村田崇人
論文Dynamics of translation by single ribosomes through mRNA secondary structures
Chunlai Chen et al.
Nature structural & molecular biology

 

 No.34 2015.2.23
担当者:齊藤雅嵩
論文The assembly dynamics of the cytolytic pore toxin ClyA
Stephan Benke et al.
Nature Communications (2015)

 

 No.33 2015.2.16
担当者:鎌形清人
論文The heat released during catalytic turnover enhances the diffusion of an enzyme
Clement Riedel et al.
Nature 517, 227-230, 2015

 No.32 2015.2.2
担当者:小井川浩之
論文Protein conformational dynamics dicate the binding affinity for a ligand
Noon-Hyeong Seo et al.
Nature Communications 5, Article number:3724,2014

 No.31 2015.1.26
担当者:高橋聡
論文: Modulation of folding energy landscape by charge-charge interactions: Linking experiments with computational modeling
Franco O. Tzul et al.
PNAS,2015, E259-E266

 No.30 2015.1.19
担当者:Subekti Rendra Graha Dwiky
論文The Covalent Trimethoprim Chemical tag Facilitates Single Molecule Imaging with Organic Fluophores
tracy Y. Wang et al.
Biophysical Journal, Volume 106, january 2014, 272-278

 No.29 2015.1.5
担当者:小野寺陽太朗
論文:Nonuniform chain collapse during early stages of staphylococcal nuclease folding detected by fluorescence resonance energy transfer and ultrarapid mixing methods.
Mizukami T et al.
Protein Sci. 2013 Oct;22 (10):1336-48

 No.28 2014.12.15
担当者:五十嵐千裕
論文:Interaction of p53 with the CCT Complex Promotes Protein Folding and Wild-Ype p53 Activity
Antonio Garcia Trinidad et al.
Molecular Cell,2013

 No.27 2014.12.8
担当者:村田崇人
論文:A viral packaging motor varies its DNA rotation and step size to preserve subunit coordination as the capsid fills
Shixin Liu et al.
Cell, 2014

 No.26 2014.11.17
担当者:齊藤雅嵩
論文:Single-molecule spectroscopy reveals chaperone-mediated expansion of substrate protein
Ruth Kellner et al.
PNAS,vol.111, no.37 (2014)

 No.25 2014.11.10
担当者:鎌形清人
論文:Protein painting reveals solvent-excluded drug targets hidden within native protein-protein interfaces
Alessandra Luchini et al.
Nature Communications, 5:4413, doi: 10.1038, ncomms5413 (2014)

 No.24 2014.10.27
担当者:小井川浩之
論文:Dari Field Microspectroscopy with Single Molecule Fluorescence Sensitivity
Alexander Weigel et al.
ACS Photonics, 2014,1(9),pp 848-856

 No.23 2014.10.20
担当者:高橋聡
論文:Energetically significant networks of coupled interactions within an unfolded protein
Jae-Hyun Cho et al.
PNAS, 2014,vol.111, no.33, 12079-12084

 No.22 2014.10.6
担当者:吉田文
論文:Evidence for close side-chain packing in an early protein folding intermediate previously assumed to be a molten globule
Rosen, Laura E. et al.
Proceedings of the National Academy of Sciences (2014) 201410630

 No.21 2014.9.22
担当者:村田崇人
論文:Micron-scale coherence in interphase chromatin dynamics
Alexandra Zidovska et al.
PNAS, 2013, Sep 24;110(39):15555-60

 No.20 2014.9.8
担当者:高橋律久
論文:Structure and Flexibility of Nanoscale Protein Cages Designed by Symmetric Self-Assembly
Yen-Ting Lai et al.
JACS, 2013, 135, 7738-7743

 No.19 2014.9.1
担当者:五十嵐千裕
論文:How environmental solution conditions determine the compaction velocity of single DNA molecules
ken Hirano et al.
Nucleic. Acids Research, 2011, 1-6

 No.18 2014.8.25
担当者:小野寺陽太朗
論文:Subdomain-Specific Collapse of Denatured Staphylococcal Nuclease Revealed by Single Molecule Fluorescence Resonance Energy Transfer Measurements
Pengcheng Liu et al.
J. Phys. Chem. B (2009) 113,12030-12036

 No.17 2014.8.18
担当者:切口理恵
論文:A New Protein-Protein Interaction Sensor Based on Tripartite Split-GFP Association
Stephanie Cabantous et al.
Scientific Reports (2013)

 No.16 2014.8.4
担当者:伊藤優志
論文:Redefining the Dry Molten Globule State of Proteins
Sabine Neumaier and Thomas Kiefhaber
J. Mol. Biol. (2014) 426,2520-2528

 No.15 2014.7.28
担当者:Subekti Rendra Graha Dwiky
論文:Protein activity regulation by conformational entropy
Shiou0Ru Tzeng & Charalampos G. kalodimos
Nature, Vol.488, 236-240 (2012)

 No.14 2014.7.14
担当者:齊藤雅嵩
論文:Visualizing transient protein-folding intermediates by tryptophan-scanning mutagenesis
Nature Structural & Molecular Biology, Vol.19 (2012)

 No.13 2014.7.7
担当者:吉田文
論文:Active Cage Mechanism of Chaperonin-Assisted Protein Folding Demonstrated at Single-Molecule Level
Amit J. Gupta et al.
Journal of molecular biology (2014) in press

 No.12 2014.6.30
担当者:小井川浩之
論文:Single-molecule spectroscopy reveals polymer effects of disordered proteins in crowded environments
Andrea Soranno et al.
PNAS, vol.111, no.13, 4874-4879

 No.11 2014.6.23
担当者:鎌形清人
論文:Probing Allostery Through DNA
Sangjin Kim et al.
SCIENCE, vol.339

 No.10 2014.6.16
担当者:高橋聡
論文:Accounting for a mirror-image congormation as a subtle effect in protein folding
Khatuna Kachlishvili et al.
PNAS, Early Edition

 No.9 2014.6.9
担当者:高橋律久
論文:Digital microfluidic assay for protein detection
Janine Mok et al.
PNAS (2014) 111(6) 2110-2115

 No.8 2014.6.2
担当者:小野寺陽太朗
論文:Remodeling of the Folding Free Energy Landscape of Staphylococcal Nuclease by Cavity-Creating Mutantions
Julien Roshe et al.
Biochemistry, (2012) Nov.27 ; 51 (47):9535-46

 No.7 2014.5.26
担当者:五十嵐千裕
論文: One-Pot Synthesis of DNA-CdTe:Zn2+ Nanocrystals using Na2TeO3 as the Te source
Cuiling Zhang Ji Yan et al.
ACS Appl. Mater.Interfaces (2014), 6, 3189-3194

 No.6 2014.5.19
担当者:切口理恵
論文:Automated, high-throughput platform for protein solubility screening using a split-GFP system
Pawel Listwan et al.
J Struct Funct Genomics (2009) 10:47-55

 No.5 2014.5.12
担当者:Dwiky
論文:An infrared reporter to detect spatiotemporal dynamics of protein-protein interactions
Emmanuelle Tchekanda et al.
Nature Methods (2014)

 No.4 2014.4.28
担当者: 阿蘇裕樹
論文:Nano-Analysis fo DNA Conformation Changes Induced by Transcription Factor Complex Binding Using Plasmonic nanodimers
hiroyuki Morimura et al.
ACS NANO, vol7. no.12. 10733-10740, 2013

 No.3 2014.4.22
担当者: 伊藤優志
論文:Protein analysis by time-resolved measurements with an electro-switchable DNA chip
Andreas Langer et al.
Nature Comunications, 2013, DOI:10.1038/ncomms3099

 No.2 2014.4.14
担当者: 村田崇人
論文:Self-reproduction of supramolecular giant vesicles combined with the amplification of encapsulated DNA
Kensuke Kurihara et al.
Nature Chemistry, Vol.3, October 2011, 775-781

  No.1 2014.4.7
担当者: 齊藤雅嵩
論文:Effect of Internal Cavities on Folding Rates and Routes Revealed by Real-Time Pressure-Jump NMR Spectroscopy
Julien Roche et al.
J. Am. Chem. Soc. 2013, 135, 14610-14618