研究業績(Publication)

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2023

 

      • Long-term imaging of intranuclear Mg2+ dynamics during mitosis using a localized fluorescent probe
        Y. Matsui, T. Kowada, Y. Ding, P. R. Sahoo, K. Kikuchi, and S. Mizukami
        Chem. Commun., (2023) 24, 7048–7051

 

      • Arylazopyrazole-Based Photoswitchable Inhibitors Selective for Escherichia coli Dihydrofolate Reductase
        H. S. Sarkar, T. Mashita, T. Kowada, S. Hamaguchi, T. Sato, K. Kasahara, N. Matubayasi, T. Matsui, and S. Mizukami
        ACS Chem. Biol., (2023) 18, 340–346.

      • Zinc homeostasis governed by Golgi-resident ZnT family members regulates ERp44-mediated proteostasis at the ER-Golgi interface
        Y. Amagai, M. Yamada, T. Kowada, T. Watanabe, Y. Du, R. Liu, S. Naramoto, S. Watanabe, J. Kyozuka, T. Anelli, T. Tempio, R. Sitia, S. Mizukami, and K. Inaba
        Nat. Commun., (2023) 14, 2683.

 

2022

 

      • Clip to Click: Controlling Inverse Electron-Demand Diels–Alder Reactions with Macrocyclic Tetrazines
        I. Novianti, T. Kowada, and S. Mizukami
        Org. Lett., (2022) 24, 3223–3226.

 

      • Organelle-Level Labile Zn2+ Mapping Based on Targetable Fluorescent Sensors
        R. Liu, T. Kowada, Y. Du, Y. Amagai, T. Matsui, K. Inaba, and S. Mizukami
        ACS Sens., (2022) 7, 748–757.

 

      • Flexible Target Recognition of the Intrinsically Disordered DNA-Binding Domain of CytR Monitored by Single-Molecule Fluorescence Spectroscopy
        Shrutarshi Mitra, Hiroyuki Oikawa, Divya Rajendran, Toshiyuki Kowada, Shin Mizukami, Athi N. Naganathan, and Satoshi Takahashi
        J. Phys. Chem. B, (2022) 126, 6136–6147.

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      • Autocitrullination and Changes in the Activity of Peptidylarginine Deiminase 3 Induced by High Ca2+ Concentrations
        M. Sawata, H. Shima, K. Murayama, T. Matsui, K. Igarashi, K. Funabashi, K. Ite, K. Kizawa, H. Takahara, and M. Unno
        ACS Omega, (2022) 7, 28378–28387.

 

 

 

      • Quantitative and Repetitive Control of Subcellular Protein–Protein Interaction Using a Photochromic Dimerizer
        T. Mashita, T. Kowada, H. Yamamoto, S. Hamaguchi, T. Matsui, S. Mizukami
        ChemRxiv, (2022)

 

2021

2020

      • Quantitative imaging of labile Zn2+ in the Golgi apparatus using a localizable small-molecule fluorescent probe
        T. Kowada, T. Watanabe, Y. Amagai, R. Liu, M. Yamada, H. Takahashi, T. Matsui, K. Inaba , S. Mizukami
        Cell Chem. Biol.,  (2020) 27 , 1521-1531.

 

      • Single-cell dynamics of pannexin-1-facilitated programmed ATP loss during apoptosis
        H. Imamura, S. Sakamoto, T. Yoshida, Y. Matsui, S. Penuela, DW Laird, S. Mizukami, K. Kikuchi, A. Kakizuka
        eLife ,  ( 2020)  9 , e61960.
         

 

      • Unique Electronic Structures of the Highly Ruffled Hemes in Heme-Degrading Enzymes of Staphylococcus aureus, IsdG and IsdI, by Resonance Raman and Electron Paramagnetic Resonance Spectroscopies
        S. Takahashi, S. Nambu, T. Matsui, H. Fujii, H. Ishikawa, Y. Mizutani, K. Tsumoto, M. Ikeda-Saito
        Biochemistry, (2020) 59, 3918-3928.

 

      • Structure determination of the human TRPV1 ankyrin-repeat domain under nonreducing conditions
        M. Tanaka, K. Hayasaka, N. Ogawa, T. Kurokawa, K. Kitanishi, K. Ite, T. Matsui, Y. Mori, M. Unno
        Acta Cryst., (2020) F76, 130-137.

 

 

2019

      • Light-wavelength-based Quantitative Control of Dihydrofolate Reductase Activity Using Photochromic Isostere of Inhibitor
        T. Mashita, T. Kowada, H. Takahashi, T. Matsui, S. Mizukami
        ChemBioChem, (2019) 20, 1382-1386.

 

      • Improvement in Photostability of Fluorescein by Lanthanide Ions based on Energy Transfer-Based Triplet State Quenching
        T. Imoto, M. Muramatsu, H. Miyasaka, S. Mizukami, K. Kikuchi
        Chem. Lett., (2019) 48, 1181-1184.

 

      • Biophysical characterization of heme binding to the intrinsically disordered region of Bach1
        K. Segawa, M. Watanabe-Matsui, K. Tsuda , T. Matsui, M. Shirouzu , K. Igarashi , K. Murayama
        Eur. BiophysJ.(2019) 48, 361-369.

 

      • Functional Heme Binding to the Intrinsically Disordered C-Terminal Region of Bach1, a Transcriptional Repressor
        K. Segawa, M. Watanabe-Matsui, T. Matsui, K. Igarashi, K. Murayama
        Tohoku J. Exp. Med., (2019) 247, 153-159.

 


2018

 

      • Hydrogen sulfide bypasses the rate-limiting oxygen activation of heme oxygenase
        T. Matsui, R. Sugiyama, K. Sakanashi, Y. Tamura, M. Iida, Y. Nambu, T. Higuchi, M. Suematsu, M. Ikeda-Saito
        J. Biol. Chem., (2018) 293, 16931-16939.

        picks

 

 

      • Sensing Caspase-1 Activity Using Activatable 19F MRI Nanoprobes with Improved Turn-on Kinetics
        K. Akazawa, F. Sugihara, M. Minoshima, S. Mizukami, K. Kikuchi
        Chem. Commun., (2018) 54, 11785-11788 

      • Highly Sensitive Detection of Caspase-3/7 Activity in Living Mice Using Enzyme-Responsive 19F MRI Nanoprobes
        K. Akazawa, F. Sugihara, T. Nakamura, S. Mizukami, K. Kikuchi
        Bioconjugate Chem., (2018) 29, 1720–1728. 

      • Ratiometric Imaging of Intracellular Mg2+ Dynamics Using a Red Fluorescent Turn-off Probe and a Green Fluorescent Turn-on Probe
        Y. Matsui, S. Mizukami, K. Kikuchi
        Chem. Lett., (2018) 47, 23–26. 

      • 蛋白質ラベル化技術atiometric Imaging of 実験医学増刊「イメージングの選び方・使い方100+」p.147-149(羊土社, 1018年)
        小和田俊行, 水上進

2017

      • Intracellular protein-labeling probes for multicolor single-molecule imaging of immune receptor-adaptor molecular dynamics
        R. Sato, J. Kozuka, M. Ueda, R. Mishima, Y. Kumagai, A. Yoshimura, M. Minoshima, S. Mizukami, K. Kikuchi
        J. Am. Chem. Soc., (2017) 139, 17397–17404. 

      • Visualization of Long-term Mg2+ Dynamics in Apoptotic Cells with a Novel Targetable Fluorescent Probe
        Y. Matsui, Y. Funato, H. Imamura, H. Miki, S. Mizukami, K. Kikuchi
        Chem. Sci., (2017) 8, 8255-8264. 

      • Highly selective tridentate fluorescent probes for visualizing intracellular Mg2+ dynamics without interference from Ca2+ fluctuation
        Y. Matsui, K. K. Sadhu, S. Mizukami, K. Kikuchi
        Chem. Commun., (2017) 53, 10644-10647 

      • Enzyme-Triggered Compound Release using Functionalized Antimicrobial Peptide Derivatives
        S. Mizukami, M. Kashibe, K. Matsmoto, Y. Hori, K. Kikuchi
        Chem. Sci., (2017) 8, 3047-3053 

      • Reaction intermediates in the heme degradation reaction by HutZ from Vibrio cholera 
        T. Uchida, S. Sekine, N. Dojun, A. Lewis-Ballester, I. Ishigami, T. Matsui, S. Yeh, K. Ishimori
        Dalton Trans., (2017) 46, 8104-8109


2016

      • Real-time Intravital Imaging of pH Variation Associated with Osteoclast Activity
        H. Maeda, T. Kowada, J. Kikuta, M. Furuya, M. Shirazaki, S. Mizukami, M. Ishii, K. Kikuchi
        Nat. Chem. Biol., (2016) 12, 579-585

      • Artificial Hydrogenases based on Cobaloximes and Heme Oxygenase
        M. Bacchi, E. Veinberg, M. J. Field, J. Niklas, T. Matsui, D. M Tiede, O. G. Poluektov, M. Ikeda-Saito, M. Fontecave V. Artero
        ChemPlusChem (2016) 81, 1083-1089

CobHO

      • Charge-state-distribution analysis of Bach2 intrinsically disordered heme binding
        T. Suenaga, M. Watanabe-Matsui, H. Shima, T. Matsui, M. Ikeda-Saito, K. Igarashi, K. Murayama
        J. Biochem. (2016)  160 , 291-298.

JB2016

Previous Publications

 ・Professor Mizukami

 ・Associate Professor Matsui

 ・Assistant Professor Kowada