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2022年

論文

  1. Koji Kato , Tasuku Hamaguchi (equally contribution), Ryo Nagao, Keisuke Kawakami, Yoshifumi Ueno, Takehiro Suzuki, Hiroko Uchida, Akio Murakami, Yoshiki Nakajima, Makio Yokono, Seiji Akimoto, Naoshi Dohmae, Koji Yonekura, and Jian-Ren Shen. 2022. “Structural Basis for the Absence of Low-Energy Chlorophylls in a Photosystem I Trimer from Gloeobacter violaceus.” ELife 11:73990. doi: 10.7554/ELIFE.73990. (プレスリリース)
  2. Keisuke Kawakami,  Tasuku Hamaguchi (equally contribution), Yuu Hirose, Daisuke Kosumi, Makoto Miyata, Nobuo Kamiya, and Koji Yonekura. 2022. “Core and Rod Structures of a Thermophilic Cyanobacterial Light-Harvesting Phycobilisome.” Nature Communications 2022 13:1 13(1):1–13. doi: 10.1038/s41467-022-30962-9. (プレスリリース)
  3. Akihiro Kimura,  Hirotaka Kitoh-Nishioka, Toshimichi Aota, Tasuku Hamaguchi, Koji Yonekura, Keisuke Kawakami, Kyoko Shinzawa-Itoh, Natsuko Inoue-Kashino, Kentaro Ifuku, Eiki Yamashita, Yasuhiro Kashino, and Shigeru Itoh. 2022. “Theoretical Model of the Far-Red-Light-Adapted Photosystem I Reaction Center of Cyanobacterium Acaryochloris marina Using Chlorophyll d and the Effect of Chlorophyll Exchange.” The Journal of Physical Chemistry B 126(22):4009–21. doi: 10.1021/ACS.JPCB.2C00869.
  4. Satoru Inoue,, Kiyoshi Nikaido, Toshiki Higashino, Shunto Arai, Mutsuo Tanaka, Reiji Kumai, Seiji Tsuzuki, Sachio Horiuchi, Haruki Sugiyama, Yasutomo Segawa, Kiyofumi Takaba, Saori Maki-Yonekura, Koji Yonekura, and Tatsuo Hasegawa. 2022. “Emerging Disordered Layered-Herringbone Phase in Organic Semiconductors Unveiled by Electron Crystallography.” Chemistry of Materials 34(1). doi: 10.1021/acs.chemmater.1c02793.

 

2021年以前(2019以降のみ)

論文

  1. Tasuku Hamaguchi, Keisuke Kawakami, Kyoko Shinzawa-Itoh, Natsuko Inoue-Kashino, Shigeru Itoh, Kentaro Ifuku, Eiki Yamashita, Kou Maeda, Koji Yonekura, and Yasuhiro Kashino. 2021. “Structure of the Far-Red Light Utilizing Photosystem I of Acaryochloris marina.” Nature Communications 12(1):2333. doi: 10.1038/s41467-021-22502-8.
  2. Keito Hiragi, Kazuya Nishio, Shu Moriyama, Tasuku Hamaguchi, Akira Mizoguchi, Koji Yonekura, Kazutoshi Tani, and Tsunehiro Mizushima. 2021. “Structural Insights into the Targeting Specificity of Ubiquitin Ligase for S. cerevisiae Isocitrate Lyase but Not C. Albicans Isocitrate Lyase.” Journal of Structural Biology 213(3):107748. doi: 10.1016/j.jsb.2021.107748.
  3. Koji Kato, Naoyuki Miyazaki, Tasuku Hamaguchi (equally contribution), Yoshiki Nakajima, Fusamichi Akita, Koji Yonekura, and Jian-Ren Shen. 2021. “High-Resolution Cryo-EM Structure of Photosystem II Reveals Damage from High-Dose Electron Beams.” Communications Biology 4(1):382. doi: 10.1038/s42003-021-01919-3.
  4. Keisuke Kawakami, Ryo Nagao, Yuhei O. Tahara, Tasuku Hamaguchi, Takehiro Suzuki, Naoshi Dohmae, Daisuke Kosumi, Jian Ren Shen, Makoto Miyata, Koji Yonekura, and Nobuo Kamiya. 2021. “Structural Implications for a Phycobilisome Complex from the Thermophilic Cyanobacterium Thermosynechococcus vulcanus.” Biochimica et Biophysica Acta (BBA) – Bioenergetics 1862(9):148458. doi: 10.1016/J.BBABIO.2021.148458.
  5. Koji Yonekura, Saori Maki-Yonekura, Tasuku Hamaguchi, Hisashi Naitow, Kiyofumi Takaba, and Keisuke Kawakami. 2021. “Cryo-EM and ED with a Cold-Field Emission Beam and Energy Filtration.” 233–41. doi: 10.1007/978-981-16-2982-2_23.
  6. Koji Yonekura, Saori Maki-Yonekura, Hisashi Naitow, Tasuku Hamaguchi, and Kiyofumi Takaba. 2021. “Machine Learning-Based Real-Time Object Locator/Evaluator for Cryo-EM Data Collection.” Communications Biology 2021 4:1 4(1):1–8. doi: 10.1038/s42003-021-02577-1. (プレスリリース)
  7.  Huaxin Yu, Tasuku Hamaguchi (equally contribution), Yoshiki Nakajima, Koji Kato, Keisuke Kawakami, Fusamichi Akita, Koji Yonekura, and Jian Ren Shen. 2021. “Cryo-EM Structure of Monomeric Photosystem II at 2.78 Å Resolution Reveals Factors Important for the Formation of Dimer.” Biochimica et Biophysica Acta (BBA) – Bioenergetics 1862(10):148471. doi: 10.1016/J.BBABIO.2021.148471.
  8. Koji yonekura, Saori Maki-Yonekura, Kiyofumi Takaba, Tasuku Hamaguchi, Hisashi Naitow, and Keisuke Kawakami. 2021. “Complementary Use of High-Resolution and High-Precision Cryo-ED and EM.” Microscopy and Microanalysis 27(S1). doi: 10.1017/s143192762100132x.
  9. Kenta kato, Kiyofumi Takaba, Saori Maki-Yonekura, Nobuhiko Mitoma, Yusuke Nakanishi, Taishi Nishihara, Taito Hatakeyama, Takuma Kawada, Yuh Hijikata, Jenny Pirillo, Lawrence T. Scott, Koji Yonekura, Yasutomo Segawa, and Kenichiro Itami. 2021. “Double-Helix Supramolecular Nanofibers Assembled from Negatively Curved Nanographenes.” Journal of the American Chemical Society 143(14). doi: 10.1021/jacs.1c00863.
  10. Saori Maki-Yonekura,  Tasuku Hamaguchi, Hisashi Naitow, Kiyofumi Takaba, and Koji Yonekura. 2020. “Advances in Cryo-EM and ED with a Cold-Field Emission Beam and Energy Filtration —Refinements of the CRYO ARM 300 System in RIKEN SPring-8 Center—.” Microscopy 2020:1–9. doi: 10.1093/jmicro/dfaa052.
  11. Kiyofumi Takaba, Saori Maki-Yonekura, Satoru Inoue, Tatsuo Hasegawa, and Koji Yonekura. 2021. “Protein and Organic-Molecular Crystallography With 300kV Electrons on a Direct Electron Detector.” Frontiers in Molecular Biosciences 7. doi: 10.3389/fmolb.2020.612226.
  12. Koji Yonekura, Saori Maki-Yonekura, Tasuku Hamaguchi, Hisashi Naitow, Kiyofumi Takaba, and Keisuke Kawakami. 2021. “Cryo-EM and ED with a Cold-Field Emission Beam and Energy Filtration.” 233–41. doi: 10.1007/978-981-16-2982-2_23.
  13. Hisashi Naitow, Tasuku Hamaguchi (equally contribution), Saori Maki-Yonekura, Masamichi Isogai, Nobuyuki Yoshikawa, and Koji Yonekura. n.d. “Apple Latent Spherical Virus Structure with Stable Capsid Frame Supports Quasi-Stable Protrusions Expediting Genome Release.” doi: 10.1038/s42003-020-01217-4.
  14. Kiyofumi Takaba, Saori Maki-Yonekura, and Koji Yonekura. 2020. “Collecting Large Datasets of Rotational Electron Diffraction with ParallEM and SerialEM.” Journal of Structural Biology 211(2):107549. doi: 10.1016/j.jsb.2020.107549.
  15. Hirofumi Kurokawa, Takanori Ambo, Seiji Takahashi, and Tanetoshi Koyama. 2020. “Crystal Structure of Thermobifida fusca Cis-Prenyltransferase Reveals the Dynamic Nature of Its RXG Motif-Mediated Inter-Subunit Interactions Critical for Its Catalytic Activity.” Biochemical and Biophysical Research Communications 532(3). doi: 10.1016/j.bbrc.2020.08.062.
  16. Tasuku Hamaguchi, and Koji Yonekura. 2020. “Tidy up Cryo-EM Sample Grids with 3D Printed Tools.” Journal of Structural Biology 209(1):107414. doi: 10.1016/j.jsb.2019.107414.
  17. Candelaria Guzmán-Afonso, You lee Hong, Henri Colaux, Hirofumi Iijima, Akihiro Saitow, Takuma Fukumura, Yoshitaka Aoyama, Souhei Motoki, Tetsuo Oikawa, Toshio Yamazaki, Koji Yonekura, and Yusuke Nishiyama. 2019. “Understanding Hydrogen-Bonding Structures of Molecular Crystals via Electron and NMR Nanocrystallography.” Nature Communications 10(1). doi: 10.1038/s41467-019-11469-2.
  18. Takayuki Kato, Fumiaki Makino, Takanori Nakane, Naoya Terahara, Takeshi Kaneko, Yuko Shimizu, Sohei Motoki, Isamu Ishikawa, Koji Yonekura, and Keiichi Namba. 2019. “CryoTEM with a Cold Field Emission Gun That Moves Structural Biology into a New Stage.” Microscopy and Microanalysis 25(S2). doi: 10.1017/s1431927619005725.
  19. Marie Kubota,, Rei Matsuoka, Tateki Suzuki, Koji Yonekura, Yusuke Yanagi, and Takao Hashiguchi. 2019. “Molecular Mechanism of the Flexible Glycan Receptor Recognition by Mumps Virus.” Journal of Virology 93(15). doi: 10.1128/jvi.00344-19.
  20. Tasuku Hamaguchi,  Saori Maki-Yonekura, Hisashi Naitow, Yoshinori Matsuura, Tetsuya Ishikawa, and Koji Yonekura. 2019. “A New Cryo-EM System for Single Particle Analysis.” Journal of Structural Biology 207(1):40–48. doi: 10.1016/j.jsb.2019.04.011.
  21. Koji Yonekura,  Tetsuya Ishikawa, and Saori Maki-Yonekura. 2019. “A New Cryo-EM System for Electron 3D Crystallography by EEFD.” Journal of Structural Biology 206(2). doi: 10.1016/j.jsb.2019.03.009.
  22. Tasuku Hamaguchi, , Masaru Kawakami, Hidemitsu Furukawa, and Makoto Miyata. 2019. “Identification of Novel Protein Domain for Sialyloligosaccharide Binding Essential to Mycoplasma mobile Gliding.” FEMS Microbiology Letters 366(3). doi: 10.1093/femsle/fnz016.